Gene | 1700016K19Rik |
Chromosome | 11 |
Deletion Start | 76,003,485 |
Deletion End | 76,000,065 |
Deletion Size | 3,421 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 11
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 76,000,260 | 76,000,279 | GGCGACGGTAAGAGGAACAG |
TUP | 76,000,286 | 76,000,310 | AGGTTGCTTCGGCTCTTGGACCTGA |
TUR | 76,000,311 | 76,000,334 | AGGTAGAAGGGTATGGGAGGAATC |
TDF | 76,003,204 | 76,003,223 | GAGAGTCTGCGTTGGGATGG |
TDP | 76,003,227 | 76,003,248 | TCTCACCGACCCTGAGGCAGAA |
TDR | 76,003,273 | 76,003,293 | GTACCGCTTCCTTCGGTTGAG |
PCR Primers
Primer | Sequence |
SU | ATTTGTCACTGTCAGCTAAGC |
SD | AGGAATTCTTGCTGAGTGCC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 75 bp | + | + | - |
TDF | TDR | 90 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
17782A-B5 | VGB6 | C57BL/6NTac | |
17782A-B8 | VGB6 | C57BL/6NTac | |
17782A-D5 | VGB6 | C57BL/6NTac | |
17782A-F2 | VGB6 | C57BL/6NTac | |
17782A-E3 | VGB6 | C57BL/6NTac | |
17782A-F1 | VGB6 | C57BL/6NTac | |