17814   Rhbdl3     Status: ES cell colonies screened / QC positives

GeneRhbdl3
Chromosome11
Deletion Start80,331,904
Deletion End80,301,164
Deletion Size30,741
Genome Build38
MGI IDMGI:2179276
NCBI Gene ID246104
BAC ID433H3
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 11

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF80,301,92080,301,938CCTGCCATCTGCCGCTTAG
TUP80,301,94180,301,964CTCTTGTCTGCTGTCCTGGGAGGC
TUR80,302,00080,302,021GCCGAGAGGGAGTAGTTTCATC
TDF80,331,69080,331,712GAGCTGCTCAAAGGCAAAGAATG
TDP80,331,71680,331,737CCTCGCACCAACCTGCTGGCTC
TDR80,331,74180,331,762CAAATGCTCTGTGCCGAGATAC

PCR Primers

PrimerSequence
SUGAGGCTCGCGCGCAGAGC
SDGGCAGCTCTCATTAGCTC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR102 bp++-
TDFTDR73 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
17814A-B3VGB6C57BL/6NTac
17814A-F7VGB6C57BL/6NTac
17814A-E5VGB6C57BL/6NTac
17814A-C12VGB6C57BL/6NTac
17814A-B4VGB6C57BL/6NTac