17844   Xpc     Status: ES cell colonies screened / QC positives

GeneXpc
Chromosome6
Deletion Start91,515,796
Deletion End91,490,052
Deletion Size25,745
Genome Build38
MGI IDMGI:103557
NCBI Gene ID22591
BAC ID301A21
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 6

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF91,515,50291,515,522TGAAGGCTGAGCAGCAGAAAG
TUP91,515,47591,515,499TCGCAGTTACCAGGTGTCTCAAGGA
TUR91,515,43291,515,450TCTCGCACGCACTAGAGTC
TDF91,490,47791,490,495TGCCTGGGCATCTTCTTTC
TDP91,490,44991,490,475ACCAGCAGTTCTCACTTACGTACCTGC
TDR91,490,41091,490,428CTGCCTTGCTGGCCTTCTC

PCR Primers

PrimerSequence
SUTGAGAAACTCTGGGCCTACG
SDCGTTGTGAACGGCACTAAAG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR91 bp++-
TDFTDR86 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
17844A-A9VGB6C57BL/6NTac
17844A-D8VGB6C57BL/6NTac
17844A-D10VGB6C57BL/6NTac
17844A-G9VGB6C57BL/6NTac
17844A-G2VGB6C57BL/6NTac