Gene | Coq3 |
Chromosome | 4 |
Deletion Start | 21,910,698 |
Deletion End | 21,879,691 |
Deletion Size | 31,008 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 4
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 21,880,124 | 21,880,143 | AGCCGCCATTCAACTTGCTG |
TUP | 21,880,146 | 21,880,170 | TCCTGGAGGTGGTTCTTGCTTTCCA |
TUR | 21,880,182 | 21,880,201 | ACGTTCCCCGTGTGTCTTTC |
TDF | 21,910,428 | 21,910,450 | CAGTTGAAACTGTGGCAGGATTG |
TDP | 21,910,460 | 21,910,488 | CCTTTCTCAGGTTACTGGCATTGGAGTGA |
TDR | 21,910,504 | 21,910,522 | CACAGCATGGGCTGCATAG |
PCR Primers
Primer | Sequence |
SU | AGCGCATTGAAAGAGAATGG |
SD | AGTCAAGGGCATTGTATCTTTAAC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 78 bp | + | + | - |
TDF | TDR | 95 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
17849A-C9 | VGB6 | C57BL/6NTac | |
17849A-G4 | VGB6 | C57BL/6NTac | |