17883   Phf6     Status: ES cell colonies screened / QC positives

GenePhf6
ChromosomeX
Deletion Start52,953,596
Deletion End52,916,602
Deletion Size36,995
Genome Build38
MGI IDMGI:1918248
NCBI Gene ID70998
BAC ID423A3
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome X

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF52,916,66952,916,692GAGACAAGGAATGTGGACAGTTAC
TUP52,916,69852,916,723TCTGAAAACCAGAAGGTGGCAGCACA
TUR52,916,72452,916,742ACTCACCATGCACTTGTGG
TDF52,953,24352,953,264CAAGTTCTGGGTGTCTGTTGTC
TDP52,953,26552,953,292TCCTTCTGACAATAAGCATGTGGGCCTA
TDR52,953,35952,953,378AGCAGAGGATGTTGGGTCTC

PCR Primers

PrimerSequence
SUGTCCTCAGGCTCACCTTGTG
SDCTCTCTCTGTCCCACGAACC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR74 bp++-
TDFTDR136 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
17883A-C1VGB6C57BL/6NTac
17883A-E1VGB6C57BL/6NTac
17883A-E12VGB6C57BL/6NTac
17883A-G4VGB6C57BL/6NTac