Gene | Exoc3 |
Chromosome | 13 |
Deletion Start | 74,207,077 |
Deletion End | 74,172,003 |
Deletion Size | 35,075 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 13
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 74,206,931 | 74,206,952 | CAGAAGGGAAGCTCGGAAGAAG |
TUP | 74,206,895 | 74,206,923 | TAGAGGCCAGGCTAAAGGTAGGAGACCAT |
TUR | 74,206,849 | 74,206,871 | AGTGGCGAAGAGAAACTCAAGAC |
TDF | 74,172,184 | 74,172,203 | CCAGCCGGGACATGAAACAG |
TDP | 74,172,161 | 74,172,183 | ACCATCATGGAGACGCTGGAGCA |
TDR | 74,172,096 | 74,172,115 | TCAGACTGGGCACAACAATC |
PCR Primers
Primer | Sequence |
SU | GGCTGCTGCTGAAGTGTAGG |
SD | ACGTGGACATCCTCTATCGG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 104 bp | + | + | - |
TDF | TDR | 108 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
17918A-G12 | VGB6 | C57BL/6NTac | |
17918A-F1 | VGB6 | C57BL/6NTac | |
17918A-A12 | VGB6 | C57BL/6NTac | |