Gene | Fam83g |
Chromosome | 11 |
Deletion Start | 61,707,829 |
Deletion End | 61,684,537 |
Deletion Size | 23,293 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 11
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 61,684,947 | 61,684,967 | CATTGCCTACCGAGGTGTGAC |
TUP | 61,684,968 | 61,684,989 | CCGGGCCAGCGTCTACATGCAG |
TUR | 61,685,013 | 61,685,031 | GCGCACCACTTCCTTGATG |
TDF | 61,706,861 | 61,706,882 | GCACAAGGCGCTCTATAAACTG |
TDP | 61,706,883 | 61,706,906 | TCACAGTCCTCACTAGCTGCTGGC |
TDR | 61,706,907 | 61,706,924 | TGAGCCCACCAGGTGATG |
PCR Primers
Primer | Sequence |
SU | GGTAAGCAAGTCCCTCCTCC |
SD | CAACCTCAACCTTCCTGGAG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 85 bp | + | + | - |
TDF | TDR | 64 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
17919A-F2 | VGB6 | C57BL/6NTac | |
17919A-B7 | VGB6 | C57BL/6NTac | |