17931   Cnp     Status: ES cell colonies screened / QC positives

GeneCnp
Chromosome11
Deletion Start100,580,799
Deletion End100,575,069
Deletion Size5,731
Genome Build38
MGI IDMGI:88437
NCBI Gene ID12799
BAC ID33F16
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 11

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF100,575,280100,575,297GCCGCAGGGAAGTGAAAG
TUP100,575,298100,575,320TCGATGCTCCTTGGCGACACCAG
TUR100,575,325100,575,345GGTGCTACCCAGACCCATTTG
TDF100,580,666100,580,688GATGGATGCTGAGCCTGACTAAG
TDP100,580,692100,580,717ATGGAGGTCAAGGCCATCTTCACGGG
TDR100,580,721100,580,742CACAGGTTTGCCCTTCCCATAG

PCR Primers

PrimerSequence
SUTAAGGAACAAAGAGGTGGCG
SDCTGTGGCAGTAGCGTTTGTC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR66 bp++-
TDFTDR77 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
17931A-B2VGB6C57BL/6NTac
17931A-C10VGB6C57BL/6NTac
17931A-E3VGB6C57BL/6NTac
17931A-G5VGB6C57BL/6NTac
17931A-F8VGB6C57BL/6NTac
17931A-H7VGB6C57BL/6NTac