Gene | Rsl24d1 |
Chromosome | 9 |
Deletion Start | 73,122,432 |
Deletion End | 73,113,506 |
Deletion Size | 8,927 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 9
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 73,113,718 | 73,113,737 | TGCTGTCAGACGCTCATCTC |
TUP | 73,113,738 | 73,113,757 | ATCCGCAGGCCACCCGGCTT |
TUR | 73,113,848 | 73,113,866 | AAGGCTCAGGCACCATGTC |
TDF | 73,121,880 | 73,121,900 | CACGATGCAGAGCCCAGAAAG |
TDP | 73,121,901 | 73,121,924 | AGCTGAGAGCCTGCTTCCTTTGGC |
TDR | 73,121,952 | 73,121,971 | CAGAGCCACATGCCCTACAC |
PCR Primers
Primer | Sequence |
SU | TGCAGTCTATAGCCTCTGCG |
SD | CTGTGCTGTGTTGTGTGCTG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 149 bp | + | + | - |
TDF | TDR | 92 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
17949A-A1 | VGB6 | C57BL/6NTac | |
17949A-C5 | VGB6 | C57BL/6NTac | |
17949A-F12 | VGB6 | C57BL/6NTac | |