Gene | Kdm4b |
Chromosome | 17 |
Deletion Start | 56,386,276 |
Deletion End | 56,351,660 |
Deletion Size | 34,617 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 17
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 56,352,429 | 56,352,447 | TGAGGGCAGATGGACAGAC |
TUP | 56,352,450 | 56,352,472 | CACAAGCATCTGTGGCCCGTGCT |
TUR | 56,352,478 | 56,352,496 | TACACGGCTCGGCTCATAC |
TDF | 56,385,742 | 56,385,761 | GCTGCTCCCTAGCTTGTCTG |
TDP | 56,385,764 | 56,385,786 | TTTGCCAGACCCAGGCTTGCATC |
TDR | 56,385,816 | 56,385,837 | AATCACCCAGGACCAGGTAGTC |
PCR Primers
Primer | Sequence |
SU | AGGCTACAAGGTCTGCATGG |
SD | GGGCAGTACGGTCCACTC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 68 bp | + | + | - |
TDF | TDR | 96 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
17965A-D7 | VGB6 | C57BL/6NTac | |
17965A-D9 | VGB6 | C57BL/6NTac | |
17965A-B10 | VGB6 | C57BL/6NTac | |
17965A-F6 | VGB6 | C57BL/6NTac | |
17965A-H1 | VGB6 | C57BL/6NTac | |
17965A-A7 | VGB6 | C57BL/6NTac | |