17972 Eed Status: ES cell colonies screened / QC no positives
Gene | Eed |
Chromosome | 7 |
Deletion Start | 89,980,522 |
Deletion End | 89,954,845 |
Deletion Size | 25,678 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 7
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 89,980,455 | 89,980,476 | CGGCCAAGAAGCAGAAGTTGAG |
TUP | 89,980,431 | 89,980,453 | AGCGACGAGAACAGCAACCCGGA |
TUR | 89,980,344 | 89,980,364 | CGACCGCAGTTACCAAAGAAC |
TDF | 89,955,686 | 89,955,706 | GCTGGAGCTTGGGCTTCTAAG |
TDP | 89,955,663 | 89,955,685 | CAAGGAAGCGCCCTGGGTTTCCT |
TDR | 89,955,639 | 89,955,661 | GAGCACCAGGCTCTAAGGTATTC |
PCR Primers
Primer | Sequence |
SU | GGTGCAAAGTGTCGAGAGG |
SD | ACGCTACATGGTGGCAGAG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 133 bp | + | + | - |
TDF | TDR | 68 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |