18000   Mis18bp1     Status: ES cell colonies screened / QC positives

GeneMis18bp1
Chromosome12
Deletion Start65,161,934
Deletion End65,133,450
Deletion Size28,485
Genome Build38
MGI IDMGI:2145099
NCBI Gene ID217653
BAC ID318P15
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 12

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF65,161,25265,161,271TGGGACCGAAGAGAGAGAAC
TUP65,161,22565,161,251TGCAGACATGGTATCAAATCCCAGCAC
TUR65,161,18965,161,210CAAACTTGAGGCCAACCTAGAC
TDF65,134,28465,134,306AAGCAGTACCAGCCTTATTACAC
TDP65,134,25965,134,282AAGCAAGTGACTAGACTTTTCTAA
TDR65,134,23065,134,249GCCGTTGCCATTATCCAAAC

PCR Primers

PrimerSequence
SUTGAATGTCAAACTGCTCGTC
SDGGCTTGTAATTTCAGGCTGC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR83 bp++-
TDFTDR77 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
18000A-C9VGB6C57BL/6NTac
18000A-D8VGB6C57BL/6NTac
18000A-E3VGB6C57BL/6NTac
18000A-C6VGB6C57BL/6NTac