Gene | Abcf1 |
Chromosome | 17 |
Deletion Start | 35,969,715 |
Deletion End | 35,961,706 |
Deletion Size | 8,010 |
Genome Build | 38 |
|
|
Primer Genomic Coordinates on Chromosome 17
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | | | GAGGAAGGCGGATCTAAGTGAG |
TUP | | | TTCGAGGCCAGCCTGGTCTACA |
TUR | | | GGCAGGGCTTCTCTGTGTAG |
TDF | | | AACCTGCCGAACATTTCACAC |
TDP | | | CAGTGGTTCCTGATGGCAGAGATCGA |
TDR | | | GGCTTATCCCAAGGCACTG |
PCR Primers
Primer | Sequence |
SU | CCTGGAAATTACCATGTCCTTC |
SD | TAGGACCTCTGCTTGCTCTG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
18034A-H9 | VGB6 | C57BL/6NTac | |
18034A-F4 | VGB6 | C57BL/6NTac | |
18034A-E8 | VGB6 | C57BL/6NTac | |