18046        Status: ES cell colonies screened / QC positives

Gene
Chromosome14
Deletion Start20,693,801
Deletion End20,675,989
Deletion Size17,813
Genome Build38
MGI IDMGI:1919746
NCBI Gene ID218811
BAC ID291D2
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 14

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF20,676,35120,676,371CCAGATTCAGCAACAGCTCAC
TUP20,676,37720,676,399TGGGTGTCACCCTGGACAGCATC
TUR20,676,41820,676,437CCCTTCCATCCAGCTCTCAG
TDF20,692,81220,692,832TGGGCTCAACCTCTTTGTCTG
TDP20,692,83520,692,857TGGGAGCAAGCGTCCAACAAGGT
TDR20,692,88720,692,907CCGCTGGTGATCTGACTGAAG

PCR Primers

PrimerSequence
SUAATGGCTGCTGCTGTTCTG
SDTCCAAAGGGACACACTGTTG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR87 bp++-
TDFTDR96 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
18046A-A3VGB6C57BL/6NTac
18046B-A10VGB6C57BL/6NTac
18046B-E5VGB6C57BL/6NTac
18046B-H10VGB6C57BL/6NTac