Gene | Mcm10 |
Chromosome | 2 |
Deletion Start | 5,010,692 |
Deletion End | 4,991,340 |
Deletion Size | 19,353 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 2
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 5,010,589 | 5,010,607 | GGGAGCCAGGACTGCTTAG |
TUP | 5,010,555 | 5,010,584 | TTACATCCAACTTACATGTCAGACCAGGGA |
TUR | 5,010,533 | 5,010,553 | GAGTCAGACCACCCAGTTCAG |
TDF | 4,991,671 | 4,991,692 | CCTGTTCCTTCAGGGTCTCATC |
TDP | 4,991,642 | 4,991,670 | CCCAGTGGTTTAAGAACTCCCACAAGTCC |
TDR | 4,991,586 | 4,991,605 | TTCCCAGGGCCATCTGTTAC |
PCR Primers
Primer | Sequence |
SU | TGTCTCTCCTGCTTCAATGG |
SD | TCAACAGAAGGAAACCCTGG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 75 bp | + | + | - |
TDF | TDR | 107 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
18153A-H12 | VGB6 | C57BL/6NTac | |
18153A-B2 | VGB6 | C57BL/6NTac | |
18153A-D1 | VGB6 | C57BL/6NTac | |
18153A-G9 | VGB6 | C57BL/6NTac | |
18153A-G1 | VGB6 | C57BL/6NTac | |
18153A-B1 | VGB6 | C57BL/6NTac | |