Gene | Avp |
Chromosome | 2 |
Deletion Start | 130,582,538 |
Deletion End | 130,580,626 |
Deletion Size | 1,913 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 2
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 130,582,519 | 130,582,536 | CGCCAGGATGCTCAACAC |
TUP | 130,582,494 | 130,582,517 | ACGCTCTCCGCTTGTTTCCTGAGC |
TUR | 130,582,449 | 130,582,470 | TCTTGGGCAGTTCTGGAAGTAG |
TDF | 130,581,398 | 130,581,416 | TGATGACCCAGCCGGTTAG |
TDP | 130,581,372 | 130,581,395 | TTTCACTCTTGCCCTTACCGCTGC |
TDR | 130,581,344 | 130,581,362 | CTGGTGCTCTGGCGATGTC |
PCR Primers
Primer | Sequence |
SU | ACCTCACTGATCGCACAGC |
SD | TATTCCGGTCTCAGCCAAAG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 88 bp | + | + | - |
TDF | TDR | 73 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
18182A-A4 | VGB6 | C57BL/6NTac | |
18182A-A6 | VGB6 | C57BL/6NTac | |
18182A-B7 | VGB6 | C57BL/6NTac | |
18182A-F6 | VGB6 | C57BL/6NTac | |
18182A-F10 | VGB6 | C57BL/6NTac | |