Gene | Acsbg2 |
Chromosome | 17 |
Deletion Start | 56,872,848 |
Deletion End | 56,845,364 |
Deletion Size | 27,485 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 17
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 56,872,697 | 56,872,719 | TGTCCCGTTCTTCCTGGTTATTG |
TUP | 56,872,666 | 56,872,694 | TATGAAGTAGCACGTGGTCAGCAGTTTGG |
TUR | 56,872,611 | 56,872,630 | CCTGTGCTGTGCCTCTTGAC |
TDF | 56,845,961 | 56,845,980 | CAGGGCAGACACCTTTACAC |
TDP | 56,845,935 | 56,845,960 | TCTGGAGGTTACATCCTCACGGTGGG |
TDR | 56,845,883 | 56,845,904 | GGTCCTCGATAAGGGCAAACAG |
PCR Primers
Primer | Sequence |
SU | ATGGTGAGCTGACTGGCTG |
SD | ACAGAATTTCCAGAGCCCAG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 109 bp | + | + | - |
TDF | TDR | 98 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
18191A-B3 | VGB6 | C57BL/6NTac | |
18191A-D4 | VGB6 | C57BL/6NTac | |
18191A-D11 | VGB6 | C57BL/6NTac | |
18191A-D7 | VGB6 | C57BL/6NTac | |