Gene | Arf3 |
Chromosome | 15 |
Deletion Start | 98,742,737 |
Deletion End | 98,740,306 |
Deletion Size | 2,432 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 15
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 98,742,404 | 98,742,422 | CACTCAGCAGTGCCCTCAG |
TUP | 98,742,369 | 98,742,398 | AGGCTTGGTTTGTTCTCTGTGTTGTTTGGA |
TUR | 98,742,333 | 98,742,354 | GCCTCTGGCAGGAACATCAAAG |
TDF | 98,740,838 | 98,740,860 | GCTTCTTCATGCTCTTCTCCTTG |
TDP | 98,740,813 | 98,740,834 | CCCAGCCCAGCTGTGTCAGCAG |
TDR | 98,740,769 | 98,740,790 | TCCTGAACAGACATGCTACCAC |
PCR Primers
Primer | Sequence |
SU | TTCAGTCTGGGTGTGAGTGG |
SD | CAGTGCCAAACAGCAAACAG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 90 bp | + | + | - |
TDF | TDR | 92 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
18250A-E1 | VGB6 | C57BL/6NTac | |