Gene | Fam63a |
Chromosome | 3 |
Deletion Start | 95,295,777 |
Deletion End | 95,287,951 |
Deletion Size | 7,827 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 3
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 95,288,420 | 95,288,439 | TGCTGGGCAGGTAAGATGTC |
TUP | 95,288,440 | 95,288,467 | CACAGATGTGCCTTCCAAAGATGCTTGC |
TUR | 95,288,480 | 95,288,502 | GCGTGGTCTTGTAAGGAATTGTC |
TDF | 95,295,378 | 95,295,399 | CAACAGCAAGCAGTTCAACCTG |
TDP | 95,295,400 | 95,295,420 | TGCGAACAAGGGCTCCTTCGC |
TDR | 95,295,440 | 95,295,459 | AGCTCCCTTGCCGACCAAAG |
PCR Primers
Primer | Sequence |
SU | TCTTTCAGGGAAGAAGCCAG |
SD | CCAAGGTAGGAACGCAAATC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 83 bp | + | + | - |
TDF | TDR | 82 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
18317B-B11 | VGB6 | C57BL/6NTac | |
18317A-H7 | VGB6 | C57BL/6NTac | |