| Gene | Pik3ca |
| Chromosome | 3 |
| Deletion Start | 32,462,828 |
| Deletion End | 32,436,125 |
| Deletion Size | 26,704 |
| Genome Build | 38 |
|
|
Primer Genomic Coordinates on Chromosome 3
Please be aware that these oligonucleotides have been validated only by Taqman assay.
| Primer | Start | End | Sequence |
| TUF | | | CTCCCCAATGGAATGATAGTGAC |
| TUP | | | TAGAATGCCTCCGTGAGGCCACA |
| TUR | | | CAGTTCATGTTTGATGGTGACGAG |
| TDF | | | TGACCTCCAATGTTCAAGCAC |
| TDP | | | TGTTTCAGCTGCTTGAGAGGCAACA |
| TDR | | | TCTCCCTTGGCTCACACTATTC |
PCR Primers
| Primer | Sequence |
| SU | TTTCATTCTTCCCATTGCTTG |
| SD | ACTGGCAGACAAACAACAGC |
| LacInR | TTGACTGTAGCGGCTGATGTTG |
| LacInf | GGTAAACTGGCTCGGATTAGGG |
| NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
| NeoInF | TTCGGCTATGACTGGGCACAACAG |
| LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
| NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
| Forward Primer | Reverse Primer | Length | WT | HET | KO |
| SU | LacZRev | bp | - | + | + |
| NeoFwd | SD | bp | - | + | + |
| LacInf | LacInR | 210 bp | - | + | + |
| NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
| Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
| 18469A-A3 | VGB6 | C57BL/6NTac | |
| 18469A-C5 | VGB6 | C57BL/6NTac | |
| 18469A-C8 | VGB6 | C57BL/6NTac | |
| 18469A-C11 | VGB6 | C57BL/6NTac | |
| 18469A-H11 | VGB6 | C57BL/6NTac | |
| 18469A-G1 | VGB6 | C57BL/6NTac | |
