| Gene | Ccnc |
| Chromosome | 4 |
| Deletion Start | 21,748,195 |
| Deletion End | 21,727,887 |
| Deletion Size | 20,309 |
| Genome Build | 38 |
|
|
Primer Genomic Coordinates on Chromosome 4
Please be aware that these oligonucleotides have been validated only by Taqman assay.
| Primer | Start | End | Sequence |
| TUF | | | GCACCGGCAAGGGAAAGAG |
| TUP | | | TGACCCATTGTAGCTCTGTGAGGTTCC |
| TUR | | | AGCCAACCATGTCCATCCAAAG |
| TDF | | | ACAGAAGCTCCCTGAGTGAC |
| TDP | | | TCTCCACTAATGGCAGGGCCTGA |
| TDR | | | GCCTTATCTTGTCCAGCATCATC |
PCR Primers
| Primer | Sequence |
| SU | GACGCTCTGGAGGAGAATTG |
| SD | TGGTCCCTCAATGCTGAAAG |
| LacInR | TTGACTGTAGCGGCTGATGTTG |
| LacInf | GGTAAACTGGCTCGGATTAGGG |
| NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
| NeoInF | TTCGGCTATGACTGGGCACAACAG |
| LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
| NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
| Forward Primer | Reverse Primer | Length | WT | HET | KO |
| SU | LacZRev | bp | - | + | + |
| NeoFwd | SD | bp | - | + | + |
| LacInf | LacInR | 210 bp | - | + | + |
| NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
| Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
| 18768A-F12 | VGB6 | C57BL/6NTac | |
| 18768A-G7 | VGB6 | C57BL/6NTac | |
