| Gene | Mag |
| Chromosome | 7 |
| Deletion Start | 30,911,933 |
| Deletion End | 30,900,297 |
| Deletion Size | 11,637 |
| Genome Build | 38 |
|
|
Primer Genomic Coordinates on Chromosome 7
Please be aware that these oligonucleotides have been validated only by Taqman assay.
| Primer | Start | End | Sequence |
| TUF | | | CGAGCTGGGAGGCAAATAC |
| TUP | | | AGGCGACCTGGGTGGCTACAACC |
| TUR | | | GACGCTGTGCTCCGAGAAG |
| TDF | | | GACTCCCTGTGCCATCCTC |
| TDP | | | ATGCCTACCAATATCCCTGAGGGCTCC |
| TDR | | | GCCCACATCAGTCGGTCTAAG |
PCR Primers
| Primer | Sequence |
| SU | CCTCCACCTCCTGCGGTC |
| SD | CCAGGTTCCAAGAAGCACTC |
| LacInR | TTGACTGTAGCGGCTGATGTTG |
| LacInf | GGTAAACTGGCTCGGATTAGGG |
| NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
| NeoInF | TTCGGCTATGACTGGGCACAACAG |
| LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
| NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
| Forward Primer | Reverse Primer | Length | WT | HET | KO |
| SU | LacZRev | bp | - | + | + |
| NeoFwd | SD | bp | - | + | + |
| LacInf | LacInR | 210 bp | - | + | + |
| NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
| Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
| 18894A-C10 | VGB6 | C57BL/6NTac | |
| 18894A-E3 | VGB6 | C57BL/6NTac | |
| 18894A-F10 | VGB6 | C57BL/6NTac | |
| 18894A-G6 | VGB6 | C57BL/6NTac | |
